PRSice is seperated into two main parts:
Responsible for the core algorithm
Responsible for generating the bar-plot, high-resolution plot and quantile plot
You can perform PRS analysis using only the PRSice executable file (without the Rscript) with all non-plotting / R related parameters. This allow you to generate the PRS without performing the plotting, which might be useful for users who are interested in only obtaining the PRS.
usage: Rscript PRSice.R [options] \ -b <base_file> \ -t < target_file> \ --prsice <prsice_location>
PRSice Binary (R specific)¶
inform the location of the PRSice executable.