Introduction

PRSice relies on a number of open source projects to achieve the current performance. We also used algorithm found in other projects and translate them into C++ code for our own use. Below are number of projects we relies on

Open source projects

Project	Developer(s)	Description
PLINK 2	Christopher Chang	Provide the backbone of the clumping algorithm and PRS calculation
BGEN lib	Gavin Band	Provide API to handle BGEN files. Slight modification were made to accomodate PRSice's usage
Eigen C++	Gaël Guennebaud and Benoît Jacob and others	For all matrix algebra
gzstream	Deepak Bandyopadhyay and Lutz Kettner	For reading gz files
fastglm	Jared Huling, Douglas Bates, Dirk Eddelbuettel, Romain Francois and Yixuan Qiu	Basis of our glm class
RcppEigen	Douglas Bates, Dirk Eddelbuettel, Romain Francois, and Yixuan Qiu	Provide the fastlm algorithm